Sundance::Assembler Class Reference

List of all members.

Public Member Functions

Assembler (const Mesh &mesh, const RCP< EquationSet > &eqn, const Array< VectorType< double > > &rowVectorType, const Array< VectorType< double > > &colVectorType, bool partitionBCs)

Assembler (const Mesh &mesh, const RCP< EquationSet > &eqn)

const Array< RCP< DOFMapBase > > & rowMap () const

const Array< RCP< DOFMapBase > > & colMap () const

const Array< RCP
< DiscreteSpace > > & solutionSpace () const

const Array< RCP
< DiscreteSpace > > & rowSpace () const

VectorSpace< double > solnVecSpace () const

VectorSpace< double > rowVecSpace () const

const Array< RCP< Set< int > > > & bcRows ()

Playa::LinearOperator< double > allocateMatrix () const

void assemble (Playa::LinearOperator< double > &A, Array< Vector< double > > &b) const

void assembleSensitivities (Playa::LinearOperator< double > &A, Array< Vector< double > > &b) const

void assemble (Array< Vector< double > > &b) const

void evaluate (double &value, Array< Vector< double > > &gradient) const

void evaluate (double &value) const

void getGraph (int br, int bc, Array< int > &graphData, Array< int > &rowPtrs, Array< int > &nnzPerRow) const

void incrementalGetGraph (int br, int bc, IncrementallyConfigurableMatrixFactory *mf) const

void flushConfiguration () const

const RCP< EquationSet > & eqnSet () const

int maxWatchFlagSetting (const std::string &param) const

Static Public Member Functions

static int & workSetSize ()

static int & numAssembleCalls ()

static bool & matrixEliminatesRepeatedCols ()

static Time & assemblyTimer ()

static Time & configTimer ()

static Time & fillTimer ()

Private Member Functions

void init (const Mesh &mesh, const RCP< EquationSet > &eqn)

bool detectInternalBdry (int cellDim, const CellFilter &filter) const

void displayEvaluationResults (const EvalContext &context, const EvaluatableExpr *evalExpr, const Array< double > &constantCoeffs, const Array< RCP< EvalVector > > &vectorCoeffs) const

void assemblyLoop (const ComputationType &compType, RCP< AssemblyKernelBase > kernel) const

void configureMatrix (LinearOperator< double > &A, Array< Vector< double > > &b) const

void configureVector (Array< Vector< double > > &b) const

void configureMatrixBlock (int br, int bc, LinearOperator< double > &A) const

void configureVectorBlock (int br, Vector< double > &b) const

Array< Array< int > > findNonzeroBlocks () const

IntegrationCellSpecifier whetherToUseCofacets (const Array< RCP< IntegralGroup > > &groups, const EvaluatableExpr *ee, bool isMaximalCell, int verb) const

Static Private Member Functions

static int defaultWorkSetSize ()

Private Attributes

bool partitionBCs_

bool matNeedsConfiguration_

bool matNeedsFinalization_

int numConfiguredColumns_

Mesh mesh_

RCP< EquationSet > eqn_

Array< RCP< DOFMapBase > > rowMap_

Array< RCP< DOFMapBase > > colMap_

Array< RCP< DiscreteSpace > > externalRowSpace_

Array< RCP< DiscreteSpace > > externalColSpace_

Array< RCP< DiscreteSpace > > privateRowSpace_

Array< RCP< DiscreteSpace > > privateColSpace_

Array< RCP< Set< int > > > bcRows_

Array< RCP< Set< int > > > bcCols_

Array< RegionQuadCombo > rqc_

Map< ComputationType, Array
< EvalContext > > contexts_

Map< ComputationType, Array
< int > > skipRqc_

Array< int > isBCRqc_

Array< int > isInternalBdry_

Map< ComputationType, Array
< Array< RCP< IntegralGroup > > > > groups_

Array< RCP< StdFwkEvalMediator > > mediators_

Map< ComputationType, Array
< const EvaluatableExpr * > > evalExprs_

RCP< EvalManager > evalMgr_

Array< RCP< Array< int > > > isBCRow_

Array< RCP< Array< int > > > isBCCol_

Array< RCP< std::set< int > > > remoteBCCols_

Array< int > lowestRow_

Array< int > lowestCol_

Array< VectorType< double > > rowVecType_

Array< VectorType< double > > colVecType_

Map< int, int > testIDToBlockMap_

Map< int, int > unkIDToBlockMap_

Map< int, int > fixedParamIDToVectorNumber_

Map< ComputationType, Array
< IntegrationCellSpecifier > > rqcRequiresMaximalCofacets_

Detailed Description

Definition at line 73 of file SundanceAssembler.hpp.

Constructor & Destructor Documentation

Sundance::Assembler::Assembler	(	const Mesh &	mesh,
		const RCP< EquationSet > &	eqn,
		const Array< VectorType< double > > &	rowVectorType,
		const Array< VectorType< double > > &	colVectorType,
		bool	partitionBCs
	)

Sundance::Assembler::Assembler	(	const Mesh &	mesh,
		const RCP< EquationSet > &	eqn
	)

Member Function Documentation

Playa::LinearOperator<double> Sundance::Assembler::allocateMatrix ( ) const

Allocate, but do not fill, the matrix

void Sundance::Assembler::assemble ( Array< Vector< double > > & b ) const

void Sundance::Assembler::assemble	(	Playa::LinearOperator< double > &	A,
		Array< Vector< double > > &	b
	)			const

void Sundance::Assembler::assembleSensitivities	(	Playa::LinearOperator< double > &	A,
		Array< Vector< double > > &	b
	)			const

void Sundance::Assembler::assemblyLoop	(	const ComputationType &	compType,
		RCP< AssemblyKernelBase >	kernel
	)			const `[private]`

static Time& Sundance::Assembler::assemblyTimer ( ) [inline, static]

Definition at line 168 of file SundanceAssembler.hpp.

const Array<RCP<Set<int> > >& Sundance::Assembler::bcRows ( ) [inline]

Definition at line 113 of file SundanceAssembler.hpp.

References bcRows_.

const Array<RCP<DOFMapBase> >& Sundance::Assembler::colMap ( ) const [inline]

Definition at line 95 of file SundanceAssembler.hpp.

References colMap_.

static Time& Sundance::Assembler::configTimer ( ) [inline, static]

Definition at line 176 of file SundanceAssembler.hpp.

void Sundance::Assembler::configureMatrix	(	LinearOperator< double > &	A,
		Array< Vector< double > > &	b
	)			const `[private]`

void Sundance::Assembler::configureMatrixBlock	(	int	br,
		int	bc,
		LinearOperator< double > &	A
	)			const `[private]`

void Sundance::Assembler::configureVector ( Array< Vector< double > > & b ) const [private]

void Sundance::Assembler::configureVectorBlock	(	int	br,
		Vector< double > &	b
	)			const `[private]`

static int Sundance::Assembler::defaultWorkSetSize ( ) [inline, static, private]

Definition at line 239 of file SundanceAssembler.hpp.

bool Sundance::Assembler::detectInternalBdry	(	int	cellDim,
		const CellFilter &	filter
	)			const `[private]`

void Sundance::Assembler::displayEvaluationResults	(	const EvalContext &	context,
		const EvaluatableExpr *	evalExpr,
		const Array< double > &	constantCoeffs,
		const Array< RCP< EvalVector > > &	vectorCoeffs
	)			const `[private]`

const RCP<EquationSet>& Sundance::Assembler::eqnSet ( ) const [inline]

Definition at line 161 of file SundanceAssembler.hpp.

References eqn_.

void Sundance::Assembler::evaluate ( double & value ) const

void Sundance::Assembler::evaluate	(	double &	value,
		Array< Vector< double > > &	gradient
	)			const

static Time& Sundance::Assembler::fillTimer ( ) [inline, static]

Definition at line 184 of file SundanceAssembler.hpp.

Array<Array<int> > Sundance::Assembler::findNonzeroBlocks ( ) const [private]

void Sundance::Assembler::flushConfiguration ( ) const

flushes all configuration , so that it enforces the reassemble of the matrix

void Sundance::Assembler::getGraph	(	int	br,
		int	bc,
		Array< int > &	graphData,
		Array< int > &	rowPtrs,
		Array< int > &	nnzPerRow
	)			const

void Sundance::Assembler::incrementalGetGraph	(	int	br,
		int	bc,
		IncrementallyConfigurableMatrixFactory *	mf
	)			const

void Sundance::Assembler::init	(	const Mesh &	mesh,
		const RCP< EquationSet > &	eqn
	)			`[private]`

static bool& Sundance::Assembler::matrixEliminatesRepeatedCols ( ) [inline, static]

Definition at line 158 of file SundanceAssembler.hpp.

int Sundance::Assembler::maxWatchFlagSetting ( const std::string & param ) const

static int& Sundance::Assembler::numAssembleCalls ( ) [inline, static]

Definition at line 155 of file SundanceAssembler.hpp.

const Array<RCP<DOFMapBase> >& Sundance::Assembler::rowMap ( ) const [inline]

Definition at line 91 of file SundanceAssembler.hpp.

References rowMap_.

const Array<RCP<DiscreteSpace> >& Sundance::Assembler::rowSpace ( ) const [inline]

Definition at line 103 of file SundanceAssembler.hpp.

References externalRowSpace_.

VectorSpace<double> Sundance::Assembler::rowVecSpace ( ) const

VectorSpace<double> Sundance::Assembler::solnVecSpace ( ) const

const Array<RCP<DiscreteSpace> >& Sundance::Assembler::solutionSpace ( ) const [inline]

Definition at line 99 of file SundanceAssembler.hpp.

References externalColSpace_.

IntegrationCellSpecifier Sundance::Assembler::whetherToUseCofacets	(	const Array< RCP< IntegralGroup > > &	groups,
		const EvaluatableExpr *	ee,
		bool	isMaximalCell,
		int	verb
	)			const `[private]`

static int& Sundance::Assembler::workSetSize ( ) [static]

Member Data Documentation

Array<RCP<Set<int> > > Sundance::Assembler::bcCols_ [private]

Definition at line 267 of file SundanceAssembler.hpp.

Array<RCP<Set<int> > > Sundance::Assembler::bcRows_ [private]

Definition at line 265 of file SundanceAssembler.hpp.

Referenced by bcRows().

Array<RCP<DOFMapBase> > Sundance::Assembler::colMap_ [private]

Definition at line 255 of file SundanceAssembler.hpp.

Referenced by colMap().

Array<VectorType<double> > Sundance::Assembler::colVecType_ [private]

Definition at line 299 of file SundanceAssembler.hpp.

Map<ComputationType, Array<EvalContext> > Sundance::Assembler::contexts_ [private]

Definition at line 271 of file SundanceAssembler.hpp.

RCP<EquationSet> Sundance::Assembler::eqn_ [private]

Definition at line 251 of file SundanceAssembler.hpp.

Referenced by eqnSet().

Map<ComputationType, Array<const EvaluatableExpr*> > Sundance::Assembler::evalExprs_ [private]

Definition at line 283 of file SundanceAssembler.hpp.

RCP<EvalManager> Sundance::Assembler::evalMgr_ [private]

Definition at line 285 of file SundanceAssembler.hpp.

Array<RCP<DiscreteSpace> > Sundance::Assembler::externalColSpace_ [private]

Definition at line 259 of file SundanceAssembler.hpp.

Referenced by solutionSpace().

Array<RCP<DiscreteSpace> > Sundance::Assembler::externalRowSpace_ [private]

Definition at line 257 of file SundanceAssembler.hpp.

Referenced by rowSpace().

Map<int, int> Sundance::Assembler::fixedParamIDToVectorNumber_ [private]

Definition at line 305 of file SundanceAssembler.hpp.

Map<ComputationType, Array<Array<RCP<IntegralGroup> > > > Sundance::Assembler::groups_ [private]

Definition at line 279 of file SundanceAssembler.hpp.

Array<RCP<Array<int> > > Sundance::Assembler::isBCCol_ [private]

Definition at line 289 of file SundanceAssembler.hpp.

Array<RCP<Array<int> > > Sundance::Assembler::isBCRow_ [private]

Definition at line 287 of file SundanceAssembler.hpp.

Array<int> Sundance::Assembler::isBCRqc_ [private]

Definition at line 275 of file SundanceAssembler.hpp.

Array<int> Sundance::Assembler::isInternalBdry_ [private]

Definition at line 277 of file SundanceAssembler.hpp.

Array<int> Sundance::Assembler::lowestCol_ [private]

Definition at line 295 of file SundanceAssembler.hpp.

Array<int> Sundance::Assembler::lowestRow_ [private]

Definition at line 293 of file SundanceAssembler.hpp.

bool Sundance::Assembler::matNeedsConfiguration_ [mutable, private]

Definition at line 243 of file SundanceAssembler.hpp.

bool Sundance::Assembler::matNeedsFinalization_ [mutable, private]

Definition at line 245 of file SundanceAssembler.hpp.

Array<RCP<StdFwkEvalMediator> > Sundance::Assembler::mediators_ [private]

Definition at line 281 of file SundanceAssembler.hpp.

Mesh Sundance::Assembler::mesh_ [private]

Definition at line 249 of file SundanceAssembler.hpp.

int Sundance::Assembler::numConfiguredColumns_ [mutable, private]

Definition at line 247 of file SundanceAssembler.hpp.

bool Sundance::Assembler::partitionBCs_ [private]

Definition at line 241 of file SundanceAssembler.hpp.

Array<RCP<DiscreteSpace> > Sundance::Assembler::privateColSpace_ [private]

Definition at line 263 of file SundanceAssembler.hpp.

Array<RCP<DiscreteSpace> > Sundance::Assembler::privateRowSpace_ [private]

Definition at line 261 of file SundanceAssembler.hpp.

Array<RCP<std::set<int> > > Sundance::Assembler::remoteBCCols_ [private]

Definition at line 291 of file SundanceAssembler.hpp.

Array<RCP<DOFMapBase> > Sundance::Assembler::rowMap_ [private]

Definition at line 253 of file SundanceAssembler.hpp.

Referenced by rowMap().

Array<VectorType<double> > Sundance::Assembler::rowVecType_ [private]

Definition at line 297 of file SundanceAssembler.hpp.

Array<RegionQuadCombo> Sundance::Assembler::rqc_ [private]

Definition at line 269 of file SundanceAssembler.hpp.

Map<ComputationType, Array<IntegrationCellSpecifier> > Sundance::Assembler::rqcRequiresMaximalCofacets_ [private]

Definition at line 307 of file SundanceAssembler.hpp.

Map<ComputationType, Array<int> > Sundance::Assembler::skipRqc_ [private]

Definition at line 273 of file SundanceAssembler.hpp.

Map<int, int> Sundance::Assembler::testIDToBlockMap_ [private]

Definition at line 301 of file SundanceAssembler.hpp.

Map<int, int> Sundance::Assembler::unkIDToBlockMap_ [private]

Definition at line 303 of file SundanceAssembler.hpp.


Public Member Functions
	Assembler (const Mesh &mesh, const RCP< EquationSet > &eqn, const Array< VectorType< double > > &rowVectorType, const Array< VectorType< double > > &colVectorType, bool partitionBCs)
	Assembler (const Mesh &mesh, const RCP< EquationSet > &eqn)
const Array< RCP< DOFMapBase > > &	rowMap () const
const Array< RCP< DOFMapBase > > &	colMap () const
const Array< RCP < DiscreteSpace > > &	solutionSpace () const
const Array< RCP < DiscreteSpace > > &	rowSpace () const
VectorSpace< double >	solnVecSpace () const
VectorSpace< double >	rowVecSpace () const
const Array< RCP< Set< int > > > &	bcRows ()
Playa::LinearOperator< double >	allocateMatrix () const
void	assemble (Playa::LinearOperator< double > &A, Array< Vector< double > > &b) const
void	assembleSensitivities (Playa::LinearOperator< double > &A, Array< Vector< double > > &b) const
void	assemble (Array< Vector< double > > &b) const
void	evaluate (double &value, Array< Vector< double > > &gradient) const
void	evaluate (double &value) const
void	getGraph (int br, int bc, Array< int > &graphData, Array< int > &rowPtrs, Array< int > &nnzPerRow) const
void	incrementalGetGraph (int br, int bc, IncrementallyConfigurableMatrixFactory *mf) const
void	flushConfiguration () const
const RCP< EquationSet > &	eqnSet () const
int	maxWatchFlagSetting (const std::string &param) const
Static Public Member Functions
static int &	workSetSize ()
static int &	numAssembleCalls ()
static bool &	matrixEliminatesRepeatedCols ()
static Time &	assemblyTimer ()
static Time &	configTimer ()
static Time &	fillTimer ()
Private Member Functions
void	init (const Mesh &mesh, const RCP< EquationSet > &eqn)
bool	detectInternalBdry (int cellDim, const CellFilter &filter) const
void	displayEvaluationResults (const EvalContext &context, const EvaluatableExpr *evalExpr, const Array< double > &constantCoeffs, const Array< RCP< EvalVector > > &vectorCoeffs) const
void	assemblyLoop (const ComputationType &compType, RCP< AssemblyKernelBase > kernel) const
void	configureMatrix (LinearOperator< double > &A, Array< Vector< double > > &b) const
void	configureVector (Array< Vector< double > > &b) const
void	configureMatrixBlock (int br, int bc, LinearOperator< double > &A) const
void	configureVectorBlock (int br, Vector< double > &b) const
Array< Array< int > >	findNonzeroBlocks () const
IntegrationCellSpecifier	whetherToUseCofacets (const Array< RCP< IntegralGroup > > &groups, const EvaluatableExpr *ee, bool isMaximalCell, int verb) const
Static Private Member Functions
static int	defaultWorkSetSize ()
Private Attributes
bool	partitionBCs_
bool	matNeedsConfiguration_
bool	matNeedsFinalization_
int	numConfiguredColumns_
Mesh	mesh_
RCP< EquationSet >	eqn_
Array< RCP< DOFMapBase > >	rowMap_
Array< RCP< DOFMapBase > >	colMap_
Array< RCP< DiscreteSpace > >	externalRowSpace_
Array< RCP< DiscreteSpace > >	externalColSpace_
Array< RCP< DiscreteSpace > >	privateRowSpace_
Array< RCP< DiscreteSpace > >	privateColSpace_
Array< RCP< Set< int > > >	bcRows_
Array< RCP< Set< int > > >	bcCols_
Array< RegionQuadCombo >	rqc_
Map< ComputationType, Array < EvalContext > >	contexts_
Map< ComputationType, Array < int > >	skipRqc_
Array< int >	isBCRqc_
Array< int >	isInternalBdry_
Map< ComputationType, Array < Array< RCP< IntegralGroup > > > >	groups_
Array< RCP< StdFwkEvalMediator > >	mediators_
Map< ComputationType, Array < const EvaluatableExpr * > >	evalExprs_
RCP< EvalManager >	evalMgr_
Array< RCP< Array< int > > >	isBCRow_
Array< RCP< Array< int > > >	isBCCol_
Array< RCP< std::set< int > > >	remoteBCCols_
Array< int >	lowestRow_
Array< int >	lowestCol_
Array< VectorType< double > >	rowVecType_
Array< VectorType< double > >	colVecType_
Map< int, int >	testIDToBlockMap_
Map< int, int >	unkIDToBlockMap_
Map< int, int >	fixedParamIDToVectorNumber_
Map< ComputationType, Array < IntegrationCellSpecifier > >	rqcRequiresMaximalCofacets_